# MicroGlot by Athan Zhaohong Li: Open-Weight Model
Source: https://savrn.com/models/microglot
Markdown alternate of the page above; the site index is https://savrn.com/llms.txt

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## Runs On

What it takes to serve MicroGlot (3B parameters): the memory its weights need at each precision, and the cheapest way to rent enough data-center GPUs to hold them.

| Precision | Weights | Memory needed | Cheapest setup | Per hour | Also fits |
| --- | --- | --- | --- | --- | --- |
| 16-bit | 6.0 GB | 7.2 GB | 1x [MI300X](https://savrn.com/ai-index/pricing/gpus/mi300x) (192 GB) Vultr | $1.85 | [1x H100](https://savrn.com/ai-index/pricing/gpus/h100) $1.99 · [1x MI325X](https://savrn.com/ai-index/pricing/gpus/mi325x) $2.00 |
| 8-bit | 3.0 GB | 3.6 GB | 1x [MI300X](https://savrn.com/ai-index/pricing/gpus/mi300x) (192 GB) Vultr | $1.85 | [1x H100](https://savrn.com/ai-index/pricing/gpus/h100) $1.99 · [1x MI325X](https://savrn.com/ai-index/pricing/gpus/mi325x) $2.00 |
| 4-bit | 1.5 GB | 1.8 GB | 1x [MI300X](https://savrn.com/ai-index/pricing/gpus/mi300x) (192 GB) Vultr | $1.85 | [1x H100](https://savrn.com/ai-index/pricing/gpus/h100) $1.99 · [1x MI325X](https://savrn.com/ai-index/pricing/gpus/mi325x) $2.00 |

Memory is the weights at that precision plus 20% for the runtime and a short context; a long context needs more. Prices are the lowest on-demand hourly rates in the [SAVRN Index](https://savrn.com/ai-index/pricing/gpus), read Oct 7, 2026.

[MicroGlot on every accelerator the SAVRN Index prices, at every precision](https://savrn.com/models/microglot/gpus)

## Model Card

By Athan Zhaohong Li, published under cc-by-4.0, revision 3a39eadab165.

A taxonomy-informed sparse DNA foundation model for microbial genomics.

MicroGlot is a 23-layer decoder-only mixture-of-experts transformer pretrained on 378.3 billion nucleotides from 3.70 million sequences across 99,700 microbial species, spanning bacteria, archaea, fungi, protists, viruses and plasmids. It encodes the taxonomic hierarchy as hyperbolic (Poincaré) embeddings and uses them both as an input token and to steer expert routing.

Paper: [A Taxonomy-Informed Sparse DNA Foundation Model for Microbial Genomics](https://www.biorxiv.org/content/10.64898/2026.09.22.753215v2)\ Code: [github.com/athanzli/MicroGlot](https://github.com/athanzli/MicroGlot)

### Models

| Model | Input | Use it when | Load with |
| --- | --- | --- | --- |
| MicroGlot | DNA and its species | most of your sequences have a known species | from_pretrained("athanzli/MicroGlot", ...) |
| MicroGlot-plain | DNA | most of your sequences have no known species | from_pretrained("athanzli/MicroGlot", subfolder="plain", ...) |

A species is known if it is one of the 99,700 pretraining species (check with tokenizer.has_species(name)). For taxonomic classification tasks, use MicroGlot-plain, as conditioning on the species would leak the label.

### Model details

[Read the full model card (895 words)](https://savrn.com/models/microglot/card)

## Configuration

Architecture

MicroGlotForCausalLM

Layers

23

Hidden size

1,024

Feed-forward size

2,816

Vocabulary size

8,192

Experts active per token

1

RoPE base

500000

Stored precision

bfloat16

Model type

microglot

## Identity and Version

Repository

athanzli/MicroGlot

Publisher

Athan Zhaohong Li

Task

Feature extraction

Modality

Text

Library

transformers

Parameters

3B parameters

Languages

dna

Revision

3a39eadab16596b67643d57e2e7fddbdac66f311

First published

2026-09-21

Last updated

2026-10-04

## Files and Weights

21 files, 17.9 GB in total. The weights are 3 files totalling 17.9 GB in safetensors.

Weights3 files · 17.9 GB

Configuration8 files · 99.8 KB

Tokenizer6 files · 1.7 MB

Documentation2 files · 9.3 KB

Other1 file · 2.4 MB

Repository1 file · 1.5 KB

Every file

| File | Type | Size | SHA-256 |
| --- | --- | --- | --- |
| model.safetensors | Weights | 6.0 GB | 6ebe0b54218a |
| plain/model.safetensors | Weights | 6.0 GB | 256d8b6490a9 |
| species_encoder/model.safetensors | Weights | 6.0 GB | 2722cc080410 |
| config.json | Configuration | 1.9 KB | — |
| modeling_microglot.py | Configuration | 81.3 KB | — |
| plain/config.json | Configuration | 1.7 KB | — |
| plain/special_tokens_map.json | Configuration | 417 B | — |
| special_tokens_map.json | Configuration | 417 B | — |
| species_encoder/config.json | Configuration | 1.7 KB | — |
| species_encoder/special_tokens_map.json | Configuration | 417 B | — |
| tokenization_microglot.py | Configuration | 12.0 KB | — |
| LICENSE | Documentation | 1.2 KB | — |
| README.md | Documentation | 8.1 KB | — |
| species_vocab.txt | Other | 2.4 MB | — |
| .gitattributes | Repository | 1.5 KB | — |
| plain/tokenizer.json | Tokenizer | 578.8 KB | — |
| plain/tokenizer_config.json | Tokenizer | 1.0 KB | — |
| species_encoder/tokenizer.json | Tokenizer | 578.8 KB | — |
| species_encoder/tokenizer_config.json | Tokenizer | 1.0 KB | — |
| tokenizer.json | Tokenizer | 578.8 KB | — |
| tokenizer_config.json | Tokenizer | 1.2 KB | — |

## License and Download

License

cc-by-4.0

Access

Open weights, no gate

Download size

17.9 GB

[Download from Athan Zhaohong Li](https://huggingface.co/athanzli/MicroGlot)

Released by Athan Zhaohong Li through its official repository on Hugging Face. [Read the license](https://creativecommons.org/licenses/by/4.0/).

## Memory Requirements

| Precision | Weights in memory |
| --- | --- |
| As published | 17.9 GB |
| 16-bit | 6.0 GB |
| 8-bit | 3.0 GB |
| 4-bit | 1.5 GB |

Weights only, from the published parameter count; the key-value cache and runtime add to this.

## Questions About MicroGlot

### How much GPU memory does MicroGlot need?

About 7.2 GB at 16-bit and 1.8 GB at 4-bit: the weights (3B parameters) plus a working margin. A long context needs more.

### What is the cheapest GPU to run MicroGlot on?

At 16-bit, 1x MI300X from $1.85 an hour; at 4-bit, 1x MI300X from $1.85 an hour, at the lowest on-demand prices the SAVRN Index lists.

### Can I use MicroGlot commercially?

Yes. MicroGlot is released under Creative Commons Attribution 4.0. CC BY 4.0 permits sharing and adapting the work, including commercially, provided the creator is credited and changes are indicated.

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## Athan Zhaohong Li

[All models and datasets](https://savrn.com/model-publishers/athanzli)

## Versions

- [3a39eadab165](https://savrn.com/models/microglot/versions/3a39eadab165) · current 2026-10-04
- [2fad9f6ac0c8](https://savrn.com/models/microglot/versions/2fad9f6ac0c8) 2026-09-28
- [d715ea1330c6](https://savrn.com/models/microglot/versions/d715ea1330c6) 2026-09-22

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- [All feature extraction models](https://savrn.com/models/tasks/feature-extraction)
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## Source

- Repository metadata, read 2026-10-04.
- [Hugging Face record](https://huggingface.co/athanzli/MicroGlot)
- [How the hub is built](https://savrn.com/model-hub/methodology)
