Predicted monomer structures for 292,804 unique protein sequences: 38,934 from a Gene Ontology molecular-function coupling set and 254,182 audited ancestral sequence reconstructions (312 sequences occur in both).
Dataset Card
Predicted monomer structures for 292,804 unique protein sequences: 38,934 from a Gene Ontology molecular-function coupling set and 254,182 audited ancestral sequence reconstructions (312 sequences occur in both). The predictions serve as teacher labels for 1,421,494 training pairs; one structure is reused by every pair referencing that exact sequence. Sequence IDs are seq, so a prediction can always be matched back to its exact sequence. Stock open-source AlphaFold 3 with default settings — no protocol Both MSAs AlphaFold 3 builds are retained: the unpaired MSA and the paired (UniProt) MSA. The paired MSA is kept even though every input is a single chain, because AlphaFold 3 featurises it…
Excerpt from the card by N, licensed other.
Details
- Repository
- tonynzh2/afdb
- Publisher
- N
- Task category
- Other
- Tags
- biology, protein-structure, alphafold3
- Size category
- 100K<n<1M
- Languages
- Not stated by the source
- Revision
- 165626177298115c68e54a98aeb7680e2d166b0d
- Last updated
- 2026-09-18
Files
10 files, 2.9 GB in total.
Every file
| File | Type | Size | SHA-256 |
|---|---|---|---|
| LEGALLY_BINDING_TERMS_OF_USE.txt | Data | 476 B | — |
| predictions/00001_00256/part_00000.tar.zst | Data | 222.3 MB | 42ac7e9473c3 |
| predictions/00001_00256/part_00001.tar.zst | Data | 231.2 MB | 63a9dac779ec |
| predictions/00001_00256/part_00004.tar.zst | Data | 352.7 MB | b5a37e70d999 |
| predictions/00001_00256/part_00005.tar.zst | Data | 332.3 MB | 6988b2bace89 |
| predictions/00001_00256/part_00006.tar.zst | Data | 432.7 MB | 4879cd661fe6 |
| predictions/00257_00512/part_00000.tar.zst | Data | 1.4 GB | b2b0d2d58574 |
| OUTPUT_TERMS_OF_USE.md | Documentation | 13.0 KB | — |
| README.md | Documentation | 2.6 KB | — |
| .gitattributes | Repository | 2.5 KB | — |
License and Download
- License
- other
- Access
- No access gate
Released by N through its official repository on Hugging Face. Read the license.