Open-weight model
helico-masked-contact-exp22
by Tim O'Donnell timodonnell/helico-masked-contact-exp22
helico-masked-contact-exp22 is an open-weight model from Tim O'Donnell. Its published files total 3.0 GB.
Full-size 368.5M-parameter Helico initialized from Protenix basedefaultv1.0.0, fine-tuned for 20,000 optimizer updates and 640,000 weighted crop draws on the pinned Protenix-v1 PDB split.
Model Card
Full-size 368.5M-parameter Helico initialized from Protenix basedefaultv1.0.0, fine-tuned for 20,000 optimizer updates and 640,000 weighted crop draws on the pinned Protenix-v1 PDB split. This release contains regular and exponential-moving-average weights; optimizer state remains in the durable training archive. The model preserves MSA input and adds three-state unknown/no-contact/contact pair conditioning plus a symmetric contact-prediction head. Contacts use minimum token heavy-atom distance <5 Å with conservative observed-atom validity. Absorbing corruption is value-independent, with endpoint/sparse-mask oversampling and 20% MSA dropout. Coordinate diffusion and distogram parameters are…
Excerpt from the card by Tim O'Donnell.
Identity and Version
- Repository
- timodonnell/helico-masked-contact-exp22
- Publisher
- Tim O'Donnell
- Task
- Not stated by the source
- Modality
- Other
- Library
- Not stated by the source
- Parameters
- Not stated by the source
- Languages
- Not stated by the source
- Revision
- ea1f0c7bd72ba169c09ff1e9757578a089023a5d
- First published
- 2026-10-15
- Last updated
- 2026-10-16
Files and Weights
7 files, 3.0 GB in total. The weights are 2 files totalling 3.0 GB in pt.
Every file
| File | Type | Size | SHA-256 |
|---|---|---|---|
| ema.pt | Weights | 1.5 GB | 64cf2d396bfc |
| raw.pt | Weights | 1.5 GB | 8e1b8caaa7d1 |
| data.lock.json | Configuration | 19.7 KB | — |
| README.md | Documentation | 5.7 KB | — |
| ema.sha256 | Other | 73 B | — |
| raw.sha256 | Other | 73 B | — |
| .gitattributes | Repository | 1.5 KB | — |
License and Download
- License
- Not stated by the source
- Access
- Open weights, no gate
- Download size
- 3.0 GB
Released by Tim O'Donnell through its official repository on Hugging Face.
Built From
- Trained on (disclosed) timodonnell/helico-protenix-v1-pdb
Memory Requirements
| Precision | Weights in memory |
|---|---|
| As published | 3.0 GB |
Weights only, from the published parameter count; the key-value cache and runtime add to this.