reproduce_deepsea is a model from Wuzheng Dong (access requested at publisher). Its published files total 36.5 GB.
Model weights, prediction arrays, and experiment data for the DeepSEA reproduction project. The GitHub repository provides experiment code, plotting scripts, figures, and data guides.
Parameters—
Context—
Weights2.0 GB
License—
AccessAccess requested at publisher
Monthly Downloads—
Model Card
Model weights, prediction arrays, and experiment data for the DeepSEA reproduction project. The GitHub repository provides experiment code, plotting scripts, figures, and data guides. - Our final trained model, epoch 53: trainingcheckpoints/bestmodelFINALEPOCH53.pth. The root file predictornames.txt provides shared DeepSEA output feature names. For other experiments, replace the include pattern with the corresponding experiment/ / path. Shared source data, inference instructions, and reference genome sources are documented in the GitHub download guide. Academic and commercial use is prohibited through 30 November 2026. Beginning 1 December 2026, this project will be released under the MIT…
Excerpt from the card by Wuzheng Dong.
Identity and Version
- Repository
- aer0vane/reproduce_deepsea
- Publisher
- Wuzheng Dong
- Task
- Not stated by the source
- Modality
- Other
- Library
- Not stated by the source
- Parameters
- Not stated by the source
- Languages
- Not stated by the source
- Revision
- 202ba7262675b3e5da91501332c513385f9e394e
- First published
- 2026-10-05
- Last updated
- 2026-10-10
Files and Weights
214 files, 36.5 GB in total. The weights are 108 files totalling 2.0 GB in npz, pth.
Weights108 files · 2.0 GB
Configuration20 files · 40.7 KB
Documentation11 files · 10.6 KB
Other74 files · 34.6 GB
Repository1 file · 2.6 KB
Every file
| File | Type | Size | SHA-256 |
|---|---|---|---|
| experiment/Supplementary_Figure2/results/test_indices.npz | Weights | 8.8 MB | — |
| experiment/Supplementary_Figure3/results/experiment6_all_data.npz | Weights | 88.2 MB | — |
| experiment/Supplementary_Figure3/results/experiment6_raw_predictions.npz | Weights | 81.7 MB | — |
| experiment/Supplementary_Figure4/results/histone_qtl_raw_predictions.npz | Weights | 38.2 MB | — |
| experiment/Supplementary_Figure7/results/eqtl_conservation_fold00.npz | Weights | 567.5 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_conservation_fold01.npz | Weights | 566.8 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_conservation_fold02.npz | Weights | 555.5 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_conservation_fold03.npz | Weights | 581.5 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_conservation_fold04.npz | Weights | 562.5 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_conservation_fold05.npz | Weights | 574.5 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_conservation_fold06.npz | Weights | 539.4 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_conservation_fold07.npz | Weights | 568.3 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_conservation_fold08.npz | Weights | 558.9 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_conservation_fold09.npz | Weights | 538.6 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_ours_chromatin_fold00.npz | Weights | 572.5 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_ours_chromatin_fold01.npz | Weights | 573.4 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_ours_chromatin_fold02.npz | Weights | 559.9 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_ours_chromatin_fold03.npz | Weights | 585.9 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_ours_chromatin_fold04.npz | Weights | 571.8 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_ours_chromatin_fold05.npz | Weights | 578.6 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_ours_chromatin_fold06.npz | Weights | 545.4 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_ours_chromatin_fold07.npz | Weights | 574.5 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_ours_chromatin_fold08.npz | Weights | 564.4 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_ours_chromatin_fold09.npz | Weights | 547.5 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_ours_combined_fold00.npz | Weights | 580.3 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_ours_combined_fold01.npz | Weights | 581.0 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_ours_combined_fold02.npz | Weights | 568.0 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_ours_combined_fold03.npz | Weights | 592.9 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_ours_combined_fold04.npz | Weights | 578.5 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_ours_combined_fold05.npz | Weights | 586.6 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_ours_combined_fold06.npz | Weights | 553.9 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_ours_combined_fold07.npz | Weights | 582.8 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_ours_combined_fold08.npz | Weights | 572.2 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_ours_combined_fold09.npz | Weights | 554.9 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_pretrained_chromatin_fold00.npz | Weights | 577.4 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_pretrained_chromatin_fold01.npz | Weights | 578.3 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_pretrained_chromatin_fold02.npz | Weights | 565.2 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_pretrained_chromatin_fold03.npz | Weights | 590.5 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_pretrained_chromatin_fold04.npz | Weights | 576.8 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_pretrained_chromatin_fold05.npz | Weights | 583.8 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_pretrained_chromatin_fold06.npz | Weights | 550.6 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_pretrained_chromatin_fold07.npz | Weights | 579.7 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_pretrained_chromatin_fold08.npz | Weights | 569.5 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_pretrained_chromatin_fold09.npz | Weights | 552.5 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_pretrained_combined_fold00.npz | Weights | 581.1 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_pretrained_combined_fold01.npz | Weights | 581.8 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_pretrained_combined_fold02.npz | Weights | 568.8 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_pretrained_combined_fold03.npz | Weights | 593.6 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_pretrained_combined_fold04.npz | Weights | 579.5 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_pretrained_combined_fold05.npz | Weights | 587.5 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_pretrained_combined_fold06.npz | Weights | 554.5 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_pretrained_combined_fold07.npz | Weights | 583.7 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_pretrained_combined_fold08.npz | Weights | 573.0 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_pretrained_combined_fold09.npz | Weights | 555.9 KB | — |
| experiment/Supplementary_Figure7/results/gwas_conservation_fold00.npz | Weights | 495.5 KB | — |
| experiment/Supplementary_Figure7/results/gwas_conservation_fold01.npz | Weights | 489.4 KB | — |
| experiment/Supplementary_Figure7/results/gwas_conservation_fold02.npz | Weights | 494.0 KB | — |
| experiment/Supplementary_Figure7/results/gwas_conservation_fold03.npz | Weights | 497.6 KB | — |
| experiment/Supplementary_Figure7/results/gwas_conservation_fold04.npz | Weights | 487.7 KB | — |
| experiment/Supplementary_Figure7/results/gwas_conservation_fold05.npz | Weights | 496.8 KB | — |
| experiment/Supplementary_Figure7/results/gwas_conservation_fold06.npz | Weights | 488.1 KB | — |
| experiment/Supplementary_Figure7/results/gwas_conservation_fold07.npz | Weights | 492.6 KB | — |
| experiment/Supplementary_Figure7/results/gwas_conservation_fold08.npz | Weights | 489.6 KB | — |
| experiment/Supplementary_Figure7/results/gwas_conservation_fold09.npz | Weights | 478.5 KB | — |
| experiment/Supplementary_Figure7/results/gwas_ours_chromatin_fold00.npz | Weights | 500.5 KB | — |
| experiment/Supplementary_Figure7/results/gwas_ours_chromatin_fold01.npz | Weights | 495.4 KB | — |
| experiment/Supplementary_Figure7/results/gwas_ours_chromatin_fold02.npz | Weights | 497.3 KB | — |
| experiment/Supplementary_Figure7/results/gwas_ours_chromatin_fold03.npz | Weights | 500.9 KB | — |
| experiment/Supplementary_Figure7/results/gwas_ours_chromatin_fold04.npz | Weights | 495.6 KB | — |
| experiment/Supplementary_Figure7/results/gwas_ours_chromatin_fold05.npz | Weights | 500.0 KB | — |
| experiment/Supplementary_Figure7/results/gwas_ours_chromatin_fold06.npz | Weights | 492.6 KB | — |
| experiment/Supplementary_Figure7/results/gwas_ours_chromatin_fold07.npz | Weights | 497.8 KB | — |
| experiment/Supplementary_Figure7/results/gwas_ours_chromatin_fold08.npz | Weights | 494.4 KB | — |
| experiment/Supplementary_Figure7/results/gwas_ours_chromatin_fold09.npz | Weights | 486.2 KB | — |
| experiment/Supplementary_Figure7/results/gwas_ours_combined_fold00.npz | Weights | 507.3 KB | — |
| experiment/Supplementary_Figure7/results/gwas_ours_combined_fold01.npz | Weights | 502.4 KB | — |
| experiment/Supplementary_Figure7/results/gwas_ours_combined_fold02.npz | Weights | 504.8 KB | — |
| experiment/Supplementary_Figure7/results/gwas_ours_combined_fold03.npz | Weights | 507.8 KB | — |
| experiment/Supplementary_Figure7/results/gwas_ours_combined_fold04.npz | Weights | 501.7 KB | — |
| experiment/Supplementary_Figure7/results/gwas_ours_combined_fold05.npz | Weights | 507.4 KB | — |
| experiment/Supplementary_Figure7/results/gwas_ours_combined_fold06.npz | Weights | 501.1 KB | — |
| experiment/Supplementary_Figure7/results/gwas_ours_combined_fold07.npz | Weights | 505.9 KB | — |
| experiment/Supplementary_Figure7/results/gwas_ours_combined_fold08.npz | Weights | 501.5 KB | — |
| experiment/Supplementary_Figure7/results/gwas_ours_combined_fold09.npz | Weights | 493.6 KB | — |
| experiment/Supplementary_Figure7/results/gwas_pretrained_chromatin_fold00.npz | Weights | 503.9 KB | — |
| experiment/Supplementary_Figure7/results/gwas_pretrained_chromatin_fold01.npz | Weights | 499.3 KB | — |
| experiment/Supplementary_Figure7/results/gwas_pretrained_chromatin_fold02.npz | Weights | 501.4 KB | — |
| experiment/Supplementary_Figure7/results/gwas_pretrained_chromatin_fold03.npz | Weights | 504.8 KB | — |
| experiment/Supplementary_Figure7/results/gwas_pretrained_chromatin_fold04.npz | Weights | 499.6 KB | — |
| experiment/Supplementary_Figure7/results/gwas_pretrained_chromatin_fold05.npz | Weights | 504.0 KB | — |
| experiment/Supplementary_Figure7/results/gwas_pretrained_chromatin_fold06.npz | Weights | 497.1 KB | — |
| experiment/Supplementary_Figure7/results/gwas_pretrained_chromatin_fold07.npz | Weights | 502.1 KB | — |
| experiment/Supplementary_Figure7/results/gwas_pretrained_chromatin_fold08.npz | Weights | 498.3 KB | — |
| experiment/Supplementary_Figure7/results/gwas_pretrained_chromatin_fold09.npz | Weights | 490.3 KB | — |
| experiment/Supplementary_Figure7/results/gwas_pretrained_combined_fold00.npz | Weights | 507.5 KB | — |
| experiment/Supplementary_Figure7/results/gwas_pretrained_combined_fold01.npz | Weights | 502.6 KB | — |
| experiment/Supplementary_Figure7/results/gwas_pretrained_combined_fold02.npz | Weights | 505.1 KB | — |
| experiment/Supplementary_Figure7/results/gwas_pretrained_combined_fold03.npz | Weights | 508.2 KB | — |
| experiment/Supplementary_Figure7/results/gwas_pretrained_combined_fold04.npz | Weights | 502.2 KB | — |
| experiment/Supplementary_Figure7/results/gwas_pretrained_combined_fold05.npz | Weights | 507.9 KB | — |
| experiment/Supplementary_Figure7/results/gwas_pretrained_combined_fold06.npz | Weights | 501.3 KB | — |
| experiment/Supplementary_Figure7/results/gwas_pretrained_combined_fold07.npz | Weights | 506.2 KB | — |
| experiment/Supplementary_Figure7/results/gwas_pretrained_combined_fold08.npz | Weights | 502.0 KB | — |
| experiment/Supplementary_Figure7/results/gwas_pretrained_combined_fold09.npz | Weights | 494.0 KB | — |
| models/deepsea_predict.pth | Weights | 211.4 MB | — |
| training_checkpoints/archive/best_model_epoch21.pth | Weights | 211.4 MB | — |
| training_checkpoints/archive/checkpoint_epoch46_adam_auc0915.pth | Weights | 634.1 MB | — |
| training_checkpoints/best_model_FINAL_EPOCH53.pth | Weights | 634.1 MB | — |
| experiment/Figure2/input_manifest.json | Configuration | 3.3 KB | — |
| experiment/Figure3/outputs/baseline_source_manifest.json | Configuration | 2.7 KB | — |
| experiment/Figure3/outputs/eqtl_ours_summary.json | Configuration | 1.0 KB | — |
| experiment/Figure3/outputs/eqtl_pretrained_summary.json | Configuration | 1.1 KB | — |
| experiment/Figure3/outputs/eqtl_verification.json | Configuration | 350 B | — |
| experiment/Figure3/outputs/feature_verification.json | Configuration | 467 B | — |
| experiment/Figure3/outputs/gwas_ours_summary.json | Configuration | 1.0 KB | — |
| experiment/Figure3/outputs/gwas_pretrained_summary.json | Configuration | 1.1 KB | — |
| experiment/Figure3/outputs/gwas_verification.json | Configuration | 350 B | — |
| experiment/Figure3/outputs/manifest.json | Configuration | 3.2 KB | — |
| experiment/Figure3/outputs/metrics_provenance.json | Configuration | 5.2 KB | — |
| experiment/Figure3/outputs/prepared.json | Configuration | 108 B | — |
| experiment/Figure3/outputs/publisher_source_verification.json | Configuration | 1.4 KB | — |
| experiment/Figure3/outputs/run_environment_checks.json | Configuration | 1.0 KB | — |
| experiment/Figure3/outputs/source_cohort_checks.json | Configuration | 816 B | — |
| experiment/Supplementary_Figure2/results/run_metadata.json | Configuration | 488 B | — |
| experiment/Supplementary_Figure3/results/experiment6_plot_metadata.json | Configuration | 1.0 KB | — |
| experiment/Supplementary_Figure7/results/run_manifest.json | Configuration | 2.3 KB | — |
| taskB/metrics/funseq2_manifest.json | Configuration | 1.7 KB | — |
| taskB/metrics/nt50m_run_manifest.json | Configuration | 12.0 KB | — |
| README.md | Documentation | 4.1 KB | — |
| experiment/Figure2/README.md | Documentation | 539 B | — |
| experiment/Figure3/README.md | Documentation | 493 B | — |
| experiment/Supplementary_Figure1/README.md | Documentation | 385 B | — |
| experiment/Supplementary_Figure2/README.md | Documentation | 816 B | — |
| experiment/Supplementary_Figure3/README.md | Documentation | 367 B | — |
| experiment/Supplementary_Figure4/README.md | Documentation | 620 B | — |
| experiment/Supplementary_Figure6/README.md | Documentation | 2.1 KB | — |
| experiment/Supplementary_Figure7/README.md | Documentation | 468 B | — |
| experiment/experiment7_rerun/README.md | Documentation | 345 B | — |
| taskB/README.md | Documentation | 376 B | — |
| experiment/Figure2/outputs/dgf_alt_preds_ours.npy | Other | 114.0 MB | — |
| experiment/Figure2/outputs/dgf_alt_preds_pretrained.npy | Other | 114.0 MB | — |
| experiment/Figure2/outputs/dgf_ref_preds_ours.npy | Other | 114.0 MB | — |
| experiment/Figure2/outputs/dgf_ref_preds_pretrained.npy | Other | 114.0 MB | — |
| experiment/Figure2/outputs/test_labels.npy | Other | 418.2 MB | — |
| experiment/Figure2/outputs/test_predictions_ours.npy | Other | 1.7 GB | — |
| experiment/Figure2/outputs/test_predictions_pretrained.npy | Other | 1.7 GB | — |
| experiment/Figure3/outputs/auc_summary.csv | Other | 1.7 KB | — |
| experiment/Figure3/outputs/eqtl_CADD_scores.tsv.gz | Other | 19.0 MB | — |
| experiment/Figure3/outputs/eqtl_ours_oof.tsv.gz | Other | 24.7 MB | — |
| experiment/Figure3/outputs/eqtl_pretrained_oof.tsv.gz | Other | 24.8 MB | — |
| experiment/Figure3/outputs/funseq2_v2.1.0_scores.tsv.gz | Other | 2.9 MB | — |
| experiment/Figure3/outputs/gwas_CADD_scores.tsv.gz | Other | 16.9 MB | — |
| experiment/Figure3/outputs/gwas_ours_oof.tsv.gz | Other | 22.0 MB | — |
| experiment/Figure3/outputs/gwas_pretrained_oof.tsv.gz | Other | 22.0 MB | — |
| experiment/Figure3/outputs/gwava_GRCh37_scores.tsv.gz | Other | 2.6 MB | — |
| experiment/Figure3/outputs/ours_effects.npy | Other | 13.6 GB | — |
| experiment/Figure3/outputs/pretrained_effects.npy | Other | 13.6 GB | — |
| experiment/Figure3/outputs/pretrained_ours_baselines_auc.csv | Other | 7.3 KB | — |
| experiment/Figure3/outputs/variants.tsv | Other | 59.4 MB | — |
| experiment/Supplementary_Figure2/feature_models_and_indices.tar.zst | Other | 927.1 MB | — |
| experiment/Supplementary_Figure2/results/deepsea_inference_test_indices.npy | Other | 909.8 KB | — |
| experiment/Supplementary_Figure2/results/ours_same_test_predictions.npy | Other | 626.8 MB | — |
| experiment/Supplementary_Figure2/results/pretrained_same_test_predictions_agct.npy | Other | 626.8 MB | — |
| experiment/Supplementary_Figure3/sequences/snp_chr10_23508363.npy | Other | 16.1 KB | — |
| experiment/Supplementary_Figure3/sequences/snp_chr16_209709.npy | Other | 16.1 KB | — |
| experiment/Supplementary_Figure3/sequences/snp_chr16_52599188.npy | Other | 16.1 KB | — |
| experiment/Supplementary_Figure3/sequences/snp_chr1_109817590.npy | Other | 16.1 KB | — |
| experiment/Supplementary_Figure4/results/ours_variant_predictions.tsv | Other | 721.0 KB | — |
| experiment/Supplementary_Figure4/results/pretrained_variant_predictions.tsv | Other | 721.8 KB | — |
| experiment/Supplementary_Figure6/inputs/eqtl_gwas_variants_for_cadd_inclAnno.vcf.gz | Other | 9.1 MB | — |
| experiment/Supplementary_Figure6/outputs/cadd_inclAnno_batch_01.tsv.gz | Other | 8.5 MB | — |
| experiment/Supplementary_Figure6/outputs/cadd_inclAnno_batch_02.tsv.gz | Other | 8.5 MB | — |
| experiment/Supplementary_Figure6/outputs/cadd_inclAnno_batch_03.tsv.gz | Other | 7.7 MB | — |
| experiment/Supplementary_Figure6/outputs/cadd_inclAnno_batch_04.tsv.gz | Other | 7.5 MB | — |
| experiment/Supplementary_Figure6/outputs/cadd_inclAnno_batch_05.tsv.gz | Other | 7.4 MB | — |
| experiment/Supplementary_Figure6/outputs/cadd_inclAnno_batch_06.tsv.gz | Other | 7.7 MB | — |
| experiment/Supplementary_Figure6/outputs/cadd_inclAnno_batch_07.tsv.gz | Other | 7.9 MB | — |
| experiment/Supplementary_Figure6/outputs/cadd_inclAnno_batch_08.tsv.gz | Other | 7.6 MB | — |
| experiment/Supplementary_Figure6/outputs/cadd_inclAnno_batch_09.tsv.gz | Other | 7.6 MB | — |
| experiment/Supplementary_Figure6/outputs/cadd_inclAnno_batch_10.tsv.gz | Other | 7.3 MB | — |
| experiment/Supplementary_Figure6/outputs/cadd_inclAnno_batch_11.tsv.gz | Other | 7.4 MB | — |
| experiment/Supplementary_Figure6/outputs/cadd_inclAnno_batch_12.tsv.gz | Other | 7.4 MB | — |
| experiment/Supplementary_Figure6/outputs/cadd_inclAnno_batch_13.tsv.gz | Other | 7.4 MB | — |
| experiment/Supplementary_Figure6/outputs/cadd_inclAnno_batch_14.tsv.gz | Other | 7.7 MB | — |
| experiment/Supplementary_Figure6/outputs/cadd_inclAnno_batch_15.tsv.gz | Other | 8.1 MB | — |
| experiment/Supplementary_Figure6/outputs/cadd_inclAnno_batch_16.tsv.gz | Other | 7.6 MB | — |
| experiment/Supplementary_Figure6/outputs/cadd_inclAnno_batch_17.tsv.gz | Other | 7.5 MB | — |
| experiment/Supplementary_Figure6/outputs/cadd_inclAnno_batch_18.tsv.gz | Other | 8.0 MB | — |
| experiment/Supplementary_Figure6/outputs/cadd_inclAnno_batch_19.tsv.gz | Other | 7.7 MB | — |
| experiment/Supplementary_Figure6/outputs/cadd_inclAnno_batch_20.tsv.gz | Other | 7.8 MB | — |
| experiment/Supplementary_Figure6/outputs/cadd_inclAnno_batch_21.tsv.gz | Other | 7.3 MB | — |
| experiment/Supplementary_Figure6/outputs/cadd_inclAnno_batch_22.tsv.gz | Other | 7.5 MB | — |
| experiment/Supplementary_Figure6/outputs/cadd_inclAnno_batch_23.tsv.gz | Other | 7.5 MB | — |
| experiment/Supplementary_Figure6/outputs/cadd_inclAnno_batch_24.tsv.gz | Other | 8.9 MB | — |
| experiment/Supplementary_Figure6/outputs/eqtl_unsupervised_ours.tsv.gz | Other | 82.8 MB | — |
| experiment/Supplementary_Figure6/outputs/eqtl_unsupervised_pretrained.tsv.gz | Other | 83.1 MB | — |
| experiment/Supplementary_Figure6/outputs/gwas_unsupervised_ours.tsv.gz | Other | 72.5 MB | — |
| experiment/Supplementary_Figure6/outputs/gwas_unsupervised_pretrained.tsv.gz | Other | 72.8 MB | — |
| experiment/Supplementary_Figure7/results/auc_by_group.csv | Other | 5.6 KB | — |
| experiment/Supplementary_Figure7/results/eqtl_conservation_oof.tsv.gz | Other | 18.6 MB | — |
| experiment/Supplementary_Figure7/results/eqtl_ours_chromatin_oof.tsv.gz | Other | 18.7 MB | — |
| experiment/Supplementary_Figure7/results/eqtl_ours_combined_oof.tsv.gz | Other | 18.9 MB | — |
| experiment/Supplementary_Figure7/results/eqtl_pretrained_chromatin_oof.tsv.gz | Other | 18.8 MB | — |
| experiment/Supplementary_Figure7/results/eqtl_pretrained_combined_oof.tsv.gz | Other | 18.9 MB | — |
| experiment/Supplementary_Figure7/results/gwas_conservation_oof.tsv.gz | Other | 16.7 MB | — |
| experiment/Supplementary_Figure7/results/gwas_ours_chromatin_oof.tsv.gz | Other | 16.7 MB | — |
| experiment/Supplementary_Figure7/results/gwas_ours_combined_oof.tsv.gz | Other | 16.9 MB | — |
| experiment/Supplementary_Figure7/results/gwas_pretrained_chromatin_oof.tsv.gz | Other | 16.8 MB | — |
| experiment/Supplementary_Figure7/results/gwas_pretrained_combined_oof.tsv.gz | Other | 16.9 MB | — |
| predictor_names.txt | Other | 17.3 KB | — |
| taskB/metrics/funseq2_coverage.tsv | Other | 536 B | — |
| taskB/metrics/method_metrics.tsv | Other | 1.6 KB | — |
| taskB/predictions/clinvar_available_method_scores.tsv.gz | Other | 501.6 KB | — |
| .gitattributes | Repository | 2.6 KB | — |
License and Download
- License
- Not stated by the source
- Access
- Access requested at publisher
- Download size
- 2.0 GB
Request access from Wuzheng Dong
Wuzheng Dong grants access through its official repository on Hugging Face.
Memory Requirements
| Precision | Weights in memory |
|---|---|
| As published | 2.0 GB |
Weights only, from the published parameter count; the key-value cache and runtime add to this.