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OpenMed

OpenMed

healthcare AI, clinical NER, biomedical NLP, PII / de-identification, on-device AI, edge inference, Apple Silicon / MLX, data sovereignty, privacy-preserving ML, open-source

Models in Library31
Datasets in Library0
Models on Hugging Face2,269
Followers1.5k

Models

Specialized model for Chemical Entity Recognition - Chemical entities from the BC5CDR dataset This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for chemical entity recognition - chemical entities from the bc5cdr dataset. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with production-ready reliability for clinical and research…

Open weights apache-2.0 434M parameters 512 tokens transformers

Model · Token classification

OpenMed-PII-SuperClinical-Small-44M-v1

OpenMed

is a transformer-based token classification model fine-tuned for Personally Identifiable Information (PII) detection in text. This model identifies and classifies 54 types of sensitive information including names, addresses, SSNs, medical record numbers, and more. Evaluated on a stratified 2,000-sample test set from NVIDIA Nemotron-PII: These entity types have lower performance and may benefit from additional post-processing: This model detects 54 PII entity types organized into categories: Important: This model is intended as an assistive tool, not a replacement for human review.

Open weights apache-2.0 141M parameters 512 tokens transformers

Model · Token classification

OpenMed-NER-ChemicalDetect-ModernMed-149M

OpenMed

Specialized model for Chemical Entity Recognition - Identifies chemical compounds and substances in biomedical literature This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for chemical entity recognition - identifies chemical compounds and substances in biomedical literature. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with…

Open weights apache-2.0 150M parameters 8,192 tokens transformers

Model · Token classification

OpenMed-NER-PharmaDetect-BigMed-278M

OpenMed

Specialized model for Chemical Entity Recognition - Chemical entities from the BC5CDR dataset This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for chemical entity recognition - chemical entities from the bc5cdr dataset. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with production-ready reliability for clinical and research…

Open weights apache-2.0 277M parameters 514 tokens transformers

Model · Token classification

OpenMed-NER-BloodCancerDetect-TinyMed-65M

OpenMed

Specialized model for Clinical Entity Recognition - Clinical entities related to Chronic Lymphocytic Leukemia This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for clinical entity recognition - clinical entities related to chronic lymphocytic leukemia. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with production-ready reliability for…

Open weights apache-2.0 65M parameters 512 tokens transformers

Model · Token classification

OpenMed-NER-DiseaseDetect-BioMed-335M

OpenMed

Specialized model for Disease Entity Recognition - Disease entities from the BC5CDR dataset This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for disease entity recognition - disease entities from the bc5cdr dataset. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with production-ready reliability for clinical and research applications.…

Open weights apache-2.0 334M parameters 512 tokens transformers

Model · Token classification

OpenMed-NER-OncologyDetect-MultiMed-568M

OpenMed

Specialized model for Cancer Genetics - Cancer-related genetic entities This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for cancer genetics - cancer-related genetic entities. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with production-ready reliability for clinical and research applications. This model can identify and classify the…

Open weights apache-2.0 567M parameters 8,194 tokens transformers

Model · Token classification

OpenMed-NER-AnatomyDetect-ElectraMed-109M

OpenMed

Specialized model for Anatomical Entity Recognition - Anatomical structures and body parts This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for anatomical entity recognition - anatomical structures and body parts. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with production-ready reliability for clinical and research applications.…

Open weights apache-2.0 109M parameters 512 tokens transformers

Model · Token classification

OpenMed-NER-ChemicalDetect-ModernMed-395M

OpenMed

Specialized model for Chemical Entity Recognition - Identifies chemical compounds and substances in biomedical literature This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for chemical entity recognition - identifies chemical compounds and substances in biomedical literature. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with…

Open weights apache-2.0 396M parameters 8,192 tokens transformers

Model · Token classification

OpenMed-NER-DNADetect-SuperMedical-125M

OpenMed

Specialized model for Biomedical Entity Recognition - Proteins, DNA, RNA, cell lines, and cell types This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for biomedical entity recognition - proteins, dna, rna, cell lines, and cell types. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with production-ready reliability for clinical and…

Open weights apache-2.0 124M parameters 514 tokens transformers

Model · Token classification

OpenMed-NER-PathologyDetect-TinyMed-135M

OpenMed

Specialized model for Disease Entity Recognition - Disease entities from the NCBI dataset This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for disease entity recognition - disease entities from the ncbi dataset. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with production-ready reliability for clinical and research applications. This…

Open weights apache-2.0 135M parameters 512 tokens transformers

Model · Token classification

OpenMed-NER-SpeciesDetect-ElectraMed-109M

OpenMed

Specialized model for Species Entity Recognition - Species and organism names This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for species entity recognition - species and organism names. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with production-ready reliability for clinical and research applications. This model can identify and…

Open weights apache-2.0 109M parameters 512 tokens transformers

Model · Token classification

OpenMed-NER-OncologyDetect-BigMed-278M

OpenMed

Specialized model for Cancer Genetics - Cancer-related genetic entities This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for cancer genetics - cancer-related genetic entities. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with production-ready reliability for clinical and research applications. This model can identify and classify the…

Open weights apache-2.0 277M parameters 514 tokens transformers

Model · Token classification

OpenMed-NER-OrganismDetect-BioPatient-108M

OpenMed

Specialized model for Species Entity Recognition - Species names from the Species-800 dataset This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for species entity recognition - species names from the species-800 dataset. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with production-ready reliability for clinical and research…

Open weights apache-2.0 108M parameters 512 tokens transformers

Model · Token classification

OpenMed-NER-GenomicDetect-PubMed-109M

OpenMed

Specialized model for Gene Entity Recognition - Gene-related entities This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for gene entity recognition - gene-related entities. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with production-ready reliability for clinical and research applications. This model can identify and classify the…

Open weights apache-2.0 109M parameters 512 tokens transformers

Model · Token classification

OpenMed-NER-OrganismDetect-TinyMed-82M

OpenMed

Specialized model for Species Entity Recognition - Species names from the Species-800 dataset This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for species entity recognition - species names from the species-800 dataset. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with production-ready reliability for clinical and research…

Open weights apache-2.0 82M parameters 514 tokens transformers

Model · Token classification

OpenMed-NER-GenomeDetect-ModernMed-149M

OpenMed

Specialized model for Gene/Protein Entity Recognition - Gene and protein mentions This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for gene/protein entity recognition - gene and protein mentions. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with production-ready reliability for clinical and research applications. This model can…

Open weights apache-2.0 150M parameters 8,192 tokens transformers

Model · Token classification

OpenMed-NER-GenomeDetect-ModernMed-395M

OpenMed

Specialized model for Gene/Protein Entity Recognition - Gene and protein mentions This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for gene/protein entity recognition - gene and protein mentions. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with production-ready reliability for clinical and research applications. This model can…

Open weights apache-2.0 396M parameters 8,192 tokens transformers

Model · Token classification

OpenMed-NER-GenomicDetect-BigMed-560M

OpenMed

Specialized model for Gene Entity Recognition - Gene-related entities This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for gene entity recognition - gene-related entities. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with production-ready reliability for clinical and research applications. This model can identify and classify the…

Open weights apache-2.0 559M parameters 514 tokens transformers

Specialized model for Biomedical Entity Recognition - Various biomedical entities This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for biomedical entity recognition - various biomedical entities. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with production-ready reliability for clinical and research applications. This model can…

Open weights apache-2.0 141M parameters 512 tokens transformers

Model · Token classification

OpenMed-NER-ChemicalDetect-MultiMed-568M

OpenMed

Specialized model for Chemical Entity Recognition - Identifies chemical compounds and substances in biomedical literature This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for chemical entity recognition - identifies chemical compounds and substances in biomedical literature. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with…

Open weights apache-2.0 567M parameters 8,194 tokens transformers

Model · Token classification

OpenMed-NER-ChemicalDetect-BigMed-560M

OpenMed

Specialized model for Chemical Entity Recognition - Identifies chemical compounds and substances in biomedical literature This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for chemical entity recognition - identifies chemical compounds and substances in biomedical literature. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with…

Open weights apache-2.0 559M parameters 514 tokens transformers

Model · Token classification

OpenMed-NER-DiseaseDetect-ElectraMed-109M

OpenMed

Specialized model for Disease Entity Recognition - Disease entities from the BC5CDR dataset This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for disease entity recognition - disease entities from the bc5cdr dataset. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with production-ready reliability for clinical and research applications.…

Open weights apache-2.0 109M parameters 512 tokens transformers

Model · Token classification

OpenMed-NER-SpeciesDetect-ModernMed-149M

OpenMed

Specialized model for Species Entity Recognition - Species and organism names This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for species entity recognition - species and organism names. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with production-ready reliability for clinical and research applications. This model can identify and…

Open weights apache-2.0 150M parameters 8,192 tokens transformers

Specialized model for Chemical Entity Recognition - Chemical entities from the BC5CDR dataset This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for chemical entity recognition - chemical entities from the bc5cdr dataset. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with production-ready reliability for clinical and research…

Open weights apache-2.0 150M parameters 8,192 tokens transformers

Specialized model for Disease Entity Recognition - Disease entities from the BC5CDR dataset This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for disease entity recognition - disease entities from the bc5cdr dataset. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with production-ready reliability for clinical and research applications.…

Open weights apache-2.0 434M parameters 512 tokens transformers

Model · Token classification

privacy-filter-multilingual

OpenMed

Fine-tuned openai/privacy-filter for fine-grained PII extraction across 54 categories in 16 languages. The base model ships with 8 coarse PII categories and English-only training. This model trades that for a 6.75× more granular vocabulary spanning identity, contact, address, financial, vehicle, digital, and crypto labels — all evaluated across 16 languages. OpenMed gives you extractpii() / deidentify() with built-in BIOES Viterbi decoding, span refinement, and a Faker-backed obfuscation engine. Same call on every host — Apple Silicon picks up MLX automatically; everywhere else uses this PyTorch checkpoint. OpenMed/privacy-filter-multilingual-mlx model names also work in the same…

Open weights apache-2.0 1.4B parameters 131,072 tokens transformers

Specialized model for Clinical Entity Recognition - Clinical entities related to Chronic Lymphocytic Leukemia This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for clinical entity recognition - clinical entities related to chronic lymphocytic leukemia. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with production-ready reliability for…

Open weights apache-2.0 559M parameters 514 tokens transformers

Model · Token classification

OpenMed-NER-OrganismDetect-BioMed-109M

OpenMed

Specialized model for Species Entity Recognition - Species names from the Species-800 dataset This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for species entity recognition - species names from the species-800 dataset. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with production-ready reliability for clinical and research…

Open weights apache-2.0 109M parameters 512 tokens transformers

Model · Token classification

OpenMed-NER-GenomicDetect-PubMed-335M

OpenMed

Specialized model for Gene Entity Recognition - Gene-related entities This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for gene entity recognition - gene-related entities. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with production-ready reliability for clinical and research applications. This model can identify and classify the…

Open weights apache-2.0 334M parameters 512 tokens transformers

Specialized model for Species Entity Recognition - Species and organism names This model is a state-of-the-art fine-tuned transformer engineered to deliver enterprise-grade accuracy for species entity recognition - species and organism names. This specialized model excels at identifying and extracting biomedical entities from clinical texts, research papers, and healthcare documents, enabling applications such as drug interaction detection, medication extraction from patient records, adverse event monitoring, literature mining for drug discovery, and biomedical knowledge graph construction with production-ready reliability for clinical and research applications. This model can identify and…

Open weights apache-2.0 396M parameters 8,192 tokens transformers